MPI – Czit notes

deal.ii on Prometheus

przez kszyh | 11 marca 2018 - 17:59 |11 marca 2018 Linux

p4est

wget http://p4est.github.io/release/p4est-1.1.tar.gz
tar xf http://p4est.github.io/release/p4est-1.1.tar.gz
cd p4est-1.1

username=`whoami`
export CC=mpiicc
export CXX=mpiicpc
export FC=mpiifort
export F77=mpiifort
export LIBS="-lmkl_intel_lp64 -lmkl_core -lmkl_sequential"
module load plgrid/libs/boost/1.66.0

./configure --prefix=/net/people/$username/usr/ --enable-mpi
make
make install

wget http://p4est.github.io/release/p4est-1.1.tar.gz

tar xf http://p4est.github.io/release/p4est-1.1.tar.gz

cd p4est-1.1

username=`whoami`

export CC=mpiicc

export CXX=mpiicpc

export FC=mpiifort

export F77=mpiifort

export LIBS="-lmkl_intel_lp64 -lmkl_core -lmkl_sequential"

module load plgrid/libs/boost/1.66.0

./configure --prefix=/net/people/$username/usr/ --enable-mpi

make

make install

petsc

wget http://ftp.mcs.anl.gov/pub/petsc/release-snapshots/petsc-lite-3.8.3.tar.gz
tar xf petsc-lite-3.8.3.tar.gz
cd petsc-3.8.3

username=`whoami`
module load plgrid/libs/boost/1.66.0
export PETSC_DIR=`pwd`
export PETSC_ARCH=x86_64

./configure \
--with-shared=1 \
--with-x=0 \
--with-mpi=1 \
--download-hypre=1 \
--with-debugging=0 \
--prefix=/net/people/$username/usr \
--with-blas-lapack-dir=/net/software/local/intel/compilers_and_libraries_2018.0.128/linux/mkl/lib/intel64_lin \
COPTFLAGS='-O3 -march=native -mtune=native' \
CXXOPTFLAGS='-O3 -march=native -mtune=native' \
FOPTFLAGS='-O3 -march=native -mtune=native'

make
make install

wget http://ftp.mcs.anl.gov/pub/petsc/release-snapshots/petsc-lite-3.8.3.tar.gz

tar xf petsc-lite-3.8.3.tar.gz

cd petsc-3.8.3

username=`whoami`

module load plgrid/libs/boost/1.66.0

export PETSC_DIR=`pwd`

export PETSC_ARCH=x86_64

./configure \

--with-shared=1 \

--with-x=0 \

--with-mpi=1 \

--download-hypre=1 \

--with-debugging=0 \

--prefix=/net/people/$username/usr \

--with-blas-lapack-dir=/net/software/local/intel/compilers_and_libraries_2018.0.128/linux/mkl/lib/intel64_lin \

COPTFLAGS='-O3 -march=native -mtune=native' \

CXXOPTFLAGS='-O3 -march=native -mtune=native' \

FOPTFLAGS='-O3 -march=native -mtune=native'

make

make install

metis

wget http://glaros.dtc.umn.edu/gkhome/fetch/sw/metis/metis-5.1.0.tar.gz
tar xf metis-5.1.0.tar.gz
cd metis-5.1.0

module load tools/cmake/3.10.2
module load plgrid/libs/boost/1.66.0

username=`whoami`
make config shared=1 prefix=/net/people/$username/usr/ cc=/net/software/local/software/GCC/6.4.0/bin/gcc
make
make install

wget http://glaros.dtc.umn.edu/gkhome/fetch/sw/metis/metis-5.1.0.tar.gz

tar xf metis-5.1.0.tar.gz

cd metis-5.1.0

module load tools/cmake/3.10.2

module load plgrid/libs/boost/1.66.0

username=`whoami`

make config shared=1 prefix=/net/people/$username/usr/ cc=/net/software/local/software/GCC/6.4.0/bin/gcc

make

make install

deal.ii

wget https://github.com/dealii/dealii/releases/download/v8.5.1/dealii-8.5.1.tar.gz
tar xf dealii-8.5.1.tar.gz
mkdir dealii-8.5.1-build

module load tools/cmake/3.10.2
module load plgrid/libs/boost/1.66.0

username=`whoami`
export PATH=/net/people/$username/usr/bin:$PATH
export LD_LIBRARY_PATH=/net/people/$username/usr/lib:$LD_LIBRARY_PATH

cmake \
../dealii-8.5.1 \
-DCMAKE_INSTALL_PREFIX=/net/people/$username/usr/ \
-DDEAL_II_WITH_MPI=ON \
-DDEAL_II_WITH_PETSC=ON \
-DCMAKE_BUILD_TYPE=Release \
-DDEAL_II_COMPONENT_EXAMPLES=OFF
make
make install

wget https://github.com/dealii/dealii/releases/download/v8.5.1/dealii-8.5.1.tar.gz

tar xf dealii-8.5.1.tar.gz

mkdir dealii-8.5.1-build

module load tools/cmake/3.10.2

module load plgrid/libs/boost/1.66.0

username=`whoami`

export PATH=/net/people/$username/usr/bin:$PATH

export LD_LIBRARY_PATH=/net/people/$username/usr/lib:$LD_LIBRARY_PATH

cmake \

../dealii-8.5.1 \

-DCMAKE_INSTALL_PREFIX=/net/people/$username/usr/ \

-DDEAL_II_WITH_MPI=ON \

-DDEAL_II_WITH_PETSC=ON \

-DCMAKE_BUILD_TYPE=Release \

-DDEAL_II_COMPONENT_EXAMPLES=OFF

make

make install

Microsoft MPI + Boost::MPI

przez kszyh | 20 czerwca 2014 - 11:38 |20 czerwca 2014 C++, Windows

Dodaj komentarz

HPC Pack 2012 R2 MS-MPI Redistributable Package HPC Pack 2012 Client Utilities Redistributable Package HPC Pack 2012 SDK with Service Pack 1 Wyedytuj user-config.jam:

using mpi : : <include>"c:/Program Files/Microsoft MPI/Inc"
<library-path>"c:/Program Files/Microsoft MPI/Lib/i386"
<find-shared-library>msmpi
;

using mpi : : <include>"c:/Program Files/Microsoft MPI/Inc"

<library-path>"c:/Program Files/Microsoft MPI/Lib/i386"

<find-shared-library>msmpi

;

Archiwa tagu: MPI

deal.ii on Prometheus

Microsoft MPI + Boost::MPI

Ostatnie wpisy

Najnowsze komentarze

Kategorie

Meta